Carnation DB

Dca53124.1

Annotation

7-exons
f-1
sp|B9GLB3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_639592#unknown#0F0P0C
AT4G26410.1 | Symbols: | Uncharacterised conserved protein UCP022280 | chr4:13346760-13348791 FORWARD LENGTH=263
Repeat List (scaffold706)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53124.1	25	216	227	50.66	192	60	3e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9GLB3_POPTR	25	218	239	81.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53124.1	26	216	227	45.37	191	54	2e-49
Target_name	Start	End	Length	Cov(%)
AT4G26410.1	50	242	263	73.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold706	Augus-PASA	mRNA	45202	48896	.	+	.	ID=Dca53124.1;Parent=Dca53124
scaffold706	Augus-PASA	exon	45202	45372	.	+	.	ID=Dca53124.1.exon1;Parent=Dca53124.1
scaffold706	Augus-PASA	exon	45462	45528	.	+	.	ID=Dca53124.1.exon2;Parent=Dca53124.1
scaffold706	Augus-PASA	exon	46638	46715	.	+	.	ID=Dca53124.1.exon3;Parent=Dca53124.1
scaffold706	Augus-PASA	exon	47639	47691	.	+	.	ID=Dca53124.1.exon4;Parent=Dca53124.1
scaffold706	Augus-PASA	exon	48014	48150	.	+	.	ID=Dca53124.1.exon5;Parent=Dca53124.1
scaffold706	Augus-PASA	exon	48243	48307	.	+	.	ID=Dca53124.1.exon6;Parent=Dca53124.1
scaffold706	Augustus	exon	48784	48896	.	+	.	ID=Dca53124.1.exon7;Parent=Dca53124.1