Carnation DB

Dca53128.1

Annotation

9-exons
f-1
sp|B9GQM8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_756306#GO:0005525#1F0P0C
sp|B9SYL4_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1416890#unknown#0F0P0C
Repeat List (scaffold706)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53128.1	42	368	601	30.78	327	57	2e-108
Target_name	Start	End	Length	Cov(%)
sp\|B9GQM8_POPTR	69	390	575	56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53128.1	77	415	601	25.62	339	46	1e-74
Target_name	Start	End	Length	Cov(%)
AT4G13030.1	53	380	481	68.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold706	Augus-PASA	mRNA	77954	83255	.	-	.	ID=Dca53128.1;Parent=Dca53128
scaffold706	Augus-PASA	exon	77954	78592	.	-	.	ID=Dca53128.1.exon1;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	79064	79206	.	-	.	ID=Dca53128.1.exon2;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	79289	79414	.	-	.	ID=Dca53128.1.exon3;Parent=Dca53128.1
scaffold706	Augustus	exon	79753	79964	.	-	.	ID=Dca53128.1.exon4;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	80267	80441	.	-	.	ID=Dca53128.1.exon5;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	80527	80708	.	-	.	ID=Dca53128.1.exon6;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	82330	82551	.	-	.	ID=Dca53128.1.exon7;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	83008	83080	.	-	.	ID=Dca53128.1.exon8;Parent=Dca53128.1
scaffold706	Augus-PASA	exon	83222	83255	.	-	.	ID=Dca53128.1.exon9;Parent=Dca53128.1