Dca53157.1
Annotation
- 3-exons
- f-1
- sp|A5ACP2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_031477#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold707)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53157.1 |
151 |
258 |
258 |
28.29 |
108 |
67 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ACP2_VITVI |
679 |
787 |
855 |
12.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53157.1 |
160 |
253 |
258 |
22.09 |
94 |
61 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
59 |
152 |
230 |
40.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold707 |
Augustus |
mRNA |
62165 |
63265 |
. |
+ |
. |
ID=Dca53157.1;Parent=Dca53157 |
| scaffold707 |
Augustus |
exon |
62165 |
62536 |
. |
+ |
. |
ID=Dca53157.1.exon1;Parent=Dca53157.1 |
| scaffold707 |
Augustus |
exon |
62684 |
62755 |
. |
+ |
. |
ID=Dca53157.1.exon2;Parent=Dca53157.1 |
| scaffold707 |
Augustus |
exon |
62933 |
63265 |
. |
+ |
. |
ID=Dca53157.1.exon3;Parent=Dca53157.1 |
