Carnation DB

Dca5317.1

Annotation

5-exons
f-1
sp|A5AHP9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040546#GO:0003676;GO:0015074#1F1P0C
AT4G23160.1 | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262
Repeat List (scaffold1202)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5317.1	1	109	388	13.65	109	47	1e-20
Target_name	Start	End	Length	Cov(%)
sp\|A5AHP9_VITVI	199	310	1129	9.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5317.1	203	388	388	23.71	186	49	5e-49
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	75	265	1262	15.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1202	Augustus	mRNA	38323	44339	.	-	.	ID=Dca5317.1;Parent=Dca5317
scaffold1202	Augustus	exon	38323	38870	.	-	.	ID=Dca5317.1.exon1;Parent=Dca5317.1
scaffold1202	Augustus	exon	38943	39042	.	-	.	ID=Dca5317.1.exon2;Parent=Dca5317.1
scaffold1202	Augustus	exon	43003	43214	.	-	.	ID=Dca5317.1.exon3;Parent=Dca5317.1
scaffold1202	Augustus	exon	43932	44231	.	-	.	ID=Dca5317.1.exon4;Parent=Dca5317.1
scaffold1202	Augustus	exon	44333	44339	.	-	.	ID=Dca5317.1.exon5;Parent=Dca5317.1