Carnation DB

Dca532.1

Annotation

7-exons
f-1
sp|A9PE48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827243#GO:0009055;GO:0020037#2F0P0C
Os01t0935700-02 Similar to Cytochrome c1 (Fragment).
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca532.1	3	308	308	86.03	306	87	1e-155
Target_name	Start	End	Length	Cov(%)
sp\|A9PE48_POPTR	4	310	310	99.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca532.1	2	308	308	82.79	307	84	1e-142
Target_name	Start	End	Length	Cov(%)
Os01t0935700-02	3	304	305	99.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	144136	148234	.	+	.	ID=Dca532.1;Parent=Dca532
scaffold101	Augustus	exon	144136	144192	.	+	.	ID=Dca532.1.exon1;Parent=Dca532.1
scaffold101	Augustus	exon	145678	145895	.	+	.	ID=Dca532.1.exon2;Parent=Dca532.1
scaffold101	Augustus	exon	145976	146255	.	+	.	ID=Dca532.1.exon3;Parent=Dca532.1
scaffold101	Augustus	exon	146350	146421	.	+	.	ID=Dca532.1.exon4;Parent=Dca532.1
scaffold101	Augustus	exon	146771	146887	.	+	.	ID=Dca532.1.exon5;Parent=Dca532.1
scaffold101	Augustus	exon	147553	147618	.	+	.	ID=Dca532.1.exon6;Parent=Dca532.1
scaffold101	Augustus	exon	148118	148234	.	+	.	ID=Dca532.1.exon7;Parent=Dca532.1