Carnation DB

Dca53229.1

Annotation

5-exons
f-1
sp|F8WLB4_CITUN#Mechanosensitive ion channel domain-containing protein#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF47#GO:0016020;GO:0055085#0F1P1C
Repeat List (scaffold7094)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53229.1	566	775	826	9.8	210	38	5e-31
Target_name	Start	End	Length	Cov(%)
sp\|F8WLB4_CITUN	427	632	694	29.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53229.1	188	316	826	4.72	129	30	1e-06
Target_name	Start	End	Length	Cov(%)
AT5G12080.1	198	305	734	14.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7094	Augustus	mRNA	6492	9666	.	+	.	ID=Dca53229.1;Parent=Dca53229
scaffold7094	Augustus	exon	6492	8071	.	+	.	ID=Dca53229.1.exon1;Parent=Dca53229.1
scaffold7094	Augustus	exon	8355	8511	.	+	.	ID=Dca53229.1.exon2;Parent=Dca53229.1
scaffold7094	Augustus	exon	8645	8938	.	+	.	ID=Dca53229.1.exon3;Parent=Dca53229.1
scaffold7094	Augustus	exon	9042	9253	.	+	.	ID=Dca53229.1.exon4;Parent=Dca53229.1
scaffold7094	Augustus	exon	9429	9666	.	+	.	ID=Dca53229.1.exon5;Parent=Dca53229.1