Carnation DB

Dca53268.1

Annotation

7-exons
f-1
sp|B9HKK0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_720354#GO:0005524;GO:0005509;GO:0004674#3F0P0C
AT5G04870.1 | Symbols: CPK1, ATCPK1 | calcium dependent protein kinase 1 | chr5:1417015-1419877 REVERSE LENGTH=610
Repeat List (scaffold71)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53268.1	1	576	576	77.95	576	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HKK0_POPTR	1	579	579	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53268.1	1	571	576	75.69	571	72	0
Target_name	Start	End	Length	Cov(%)
AT5G04870.1	1	609	610	99.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold71	Augustus	mRNA	278909	283420	.	+	.	ID=Dca53268.1;Parent=Dca53268
scaffold71	Augustus	exon	278909	279707	.	+	.	ID=Dca53268.1.exon1;Parent=Dca53268.1
scaffold71	Augustus	exon	280145	280288	.	+	.	ID=Dca53268.1.exon2;Parent=Dca53268.1
scaffold71	Augus-PASA	exon	280384	280536	.	+	.	ID=Dca53268.1.exon3;Parent=Dca53268.1
scaffold71	Augus-PASA	exon	281481	281596	.	+	.	ID=Dca53268.1.exon4;Parent=Dca53268.1
scaffold71	Augus-PASA	exon	281753	281920	.	+	.	ID=Dca53268.1.exon5;Parent=Dca53268.1
scaffold71	Augus-PASA	exon	282466	282690	.	+	.	ID=Dca53268.1.exon6;Parent=Dca53268.1
scaffold71	Augus-PASA	exon	283295	283420	.	+	.	ID=Dca53268.1.exon7;Parent=Dca53268.1