Dca53319.1
Annotation
- 4-exons
- f-1
- sp|C5YN17_SORBI#Putative uncharacterized protein Sb07g002960#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb07g002960#GO:0003676;GO:0000166#2F0P0C
- Os08t0139000-02 Similar to RNA-binding glycine rich protein (RGP-2).
- Repeat List (scaffold711)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53319.1 |
46 |
140 |
146 |
50.68 |
95 |
78 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5YN17_SORBI |
32 |
126 |
140 |
67.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53319.1 |
45 |
140 |
146 |
47.26 |
96 |
72 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0139000-02 |
32 |
127 |
142 |
67.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold711 |
Augustus |
mRNA |
9298 |
11811 |
. |
+ |
. |
ID=Dca53319.1;Parent=Dca53319 |
| scaffold711 |
Augustus |
exon |
9298 |
9460 |
. |
+ |
. |
ID=Dca53319.1.exon1;Parent=Dca53319.1 |
| scaffold711 |
Augus-PASA |
exon |
10363 |
10431 |
. |
+ |
. |
ID=Dca53319.1.exon2;Parent=Dca53319.1 |
| scaffold711 |
Augus-PASA |
exon |
10524 |
10630 |
. |
+ |
. |
ID=Dca53319.1.exon3;Parent=Dca53319.1 |
| scaffold711 |
Augus-PASA |
exon |
11710 |
11811 |
. |
+ |
. |
ID=Dca53319.1.exon4;Parent=Dca53319.1 |
