Dca53352.1
Annotation
- 2-exons
- f-1
- sp|C5XZ49_SORBI#Putative uncharacterized protein Sb04g009135#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb04g009135#GO:0003676;GO:0015074#1F1P0C
- sp|Q2QRU0_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g26420#unknown#0F0P0C
- Repeat List (scaffold712)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53352.1 |
19 |
441 |
452 |
55.75 |
423 |
57 |
2e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5XZ49_SORBI |
365 |
798 |
801 |
54.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53352.1 |
225 |
445 |
452 |
21.46 |
221 |
44 |
7e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0432200-01 |
57 |
277 |
278 |
79.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold712 |
Augustus |
mRNA |
46451 |
47874 |
. |
- |
. |
ID=Dca53352.1;Parent=Dca53352 |
| scaffold712 |
Augustus |
exon |
46451 |
47292 |
. |
- |
. |
ID=Dca53352.1.exon1;Parent=Dca53352.1 |
| scaffold712 |
Augustus |
exon |
47358 |
47874 |
. |
- |
. |
ID=Dca53352.1.exon2;Parent=Dca53352.1 |
