Carnation DB

Dca534.1

Annotation

5-exons
f-1
sp|Q56R05_SOLLC#Putative pollen specific LIM domain-containing protein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0008270#1F0P0C
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca534.1	1	193	213	68.07	193	76	4e-83
Target_name	Start	End	Length	Cov(%)
sp\|Q56R05_SOLLC	1	179	179	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca534.1	3	201	213	56.8	199	61	9e-69
Target_name	Start	End	Length	Cov(%)
AT1G10200.1	2	189	190	98.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	156626	157788	.	-	.	ID=Dca534.1;Parent=Dca534
scaffold101	Augustus	exon	156626	156904	.	-	.	ID=Dca534.1.exon1;Parent=Dca534.1
scaffold101	Augustus	exon	157010	157099	.	-	.	ID=Dca534.1.exon2;Parent=Dca534.1
scaffold101	Augustus	exon	157186	157223	.	-	.	ID=Dca534.1.exon3;Parent=Dca534.1
scaffold101	Augustus	exon	157306	157402	.	-	.	ID=Dca534.1.exon4;Parent=Dca534.1
scaffold101	Augustus	exon	157651	157788	.	-	.	ID=Dca534.1.exon5;Parent=Dca534.1