Carnation DB

Dca53425.1

Annotation

22-exons
f-1
sp|B9RS87_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0804300#unknown#0F0P0C
Os01t0179400-01 Similar to emb2410 (embryo defective 2410).
Repeat List (scaffold714)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53425.1	41	2118	2118	64.3	2078	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RS87_RICCO	28	2119	2119	98.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53425.1	1	410	2118	9.58	410	50	4e-109
Target_name	Start	End	Length	Cov(%)
AT2G25660.1	1	396	2166	18.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold714	Augustus	mRNA	70525	84058	.	+	.	ID=Dca53425.1;Parent=Dca53425
scaffold714	Augustus	exon	70525	72461	.	+	.	ID=Dca53425.1.exon1;Parent=Dca53425.1
scaffold714	Augustus	exon	72866	73064	.	+	.	ID=Dca53425.1.exon2;Parent=Dca53425.1
scaffold714	Augustus	exon	73180	73239	.	+	.	ID=Dca53425.1.exon3;Parent=Dca53425.1
scaffold714	Augustus	exon	73644	73748	.	+	.	ID=Dca53425.1.exon4;Parent=Dca53425.1
scaffold714	Augustus	exon	73883	74023	.	+	.	ID=Dca53425.1.exon5;Parent=Dca53425.1
scaffold714	Augustus	exon	75068	75130	.	+	.	ID=Dca53425.1.exon6;Parent=Dca53425.1
scaffold714	Augustus	exon	75959	76189	.	+	.	ID=Dca53425.1.exon7;Parent=Dca53425.1
scaffold714	Augustus	exon	76616	76699	.	+	.	ID=Dca53425.1.exon8;Parent=Dca53425.1
scaffold714	Augustus	exon	76993	77150	.	+	.	ID=Dca53425.1.exon9;Parent=Dca53425.1
scaffold714	Augustus	exon	77268	77775	.	+	.	ID=Dca53425.1.exon10;Parent=Dca53425.1
scaffold714	Augustus	exon	78590	78649	.	+	.	ID=Dca53425.1.exon11;Parent=Dca53425.1
scaffold714	Augustus	exon	78880	79002	.	+	.	ID=Dca53425.1.exon12;Parent=Dca53425.1
scaffold714	Augustus	exon	79559	79834	.	+	.	ID=Dca53425.1.exon13;Parent=Dca53425.1
scaffold714	Augustus	exon	79996	80061	.	+	.	ID=Dca53425.1.exon14;Parent=Dca53425.1
scaffold714	Augustus	exon	80187	80318	.	+	.	ID=Dca53425.1.exon15;Parent=Dca53425.1
scaffold714	Augustus	exon	80738	81562	.	+	.	ID=Dca53425.1.exon16;Parent=Dca53425.1
scaffold714	Augustus	exon	81692	81972	.	+	.	ID=Dca53425.1.exon17;Parent=Dca53425.1
scaffold714	Augustus	exon	82129	82385	.	+	.	ID=Dca53425.1.exon18;Parent=Dca53425.1
scaffold714	Augustus	exon	82679	82917	.	+	.	ID=Dca53425.1.exon19;Parent=Dca53425.1
scaffold714	Augustus	exon	83000	83191	.	+	.	ID=Dca53425.1.exon20;Parent=Dca53425.1
scaffold714	Augustus	exon	83531	83803	.	+	.	ID=Dca53425.1.exon21;Parent=Dca53425.1
scaffold714	Augustus	exon	83912	84058	.	+	.	ID=Dca53425.1.exon22;Parent=Dca53425.1