Dca53436.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7141)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53436.1 |
39 |
1042 |
1042 |
50.76 |
1004 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
1026 |
1501 |
66.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53436.1 |
416 |
990 |
1042 |
21.97 |
575 |
37 |
2e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
405 |
996 |
1539 |
38.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7141 |
Augustus |
mRNA |
15091 |
18819 |
. |
- |
. |
ID=Dca53436.1;Parent=Dca53436 |
| scaffold7141 |
Augustus |
exon |
15091 |
15111 |
. |
- |
. |
ID=Dca53436.1.exon1;Parent=Dca53436.1 |
| scaffold7141 |
Augustus |
exon |
15604 |
16449 |
. |
- |
. |
ID=Dca53436.1.exon2;Parent=Dca53436.1 |
| scaffold7141 |
Augustus |
exon |
16558 |
18819 |
. |
- |
. |
ID=Dca53436.1.exon3;Parent=Dca53436.1 |
