Carnation DB

Dca53493.1

Annotation

5-exons
f-1
sp|D7T6D9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g01320#GO:0031461;GO:0031625;GO:0006511#1F1P1C
sp|B9RT30_RICCO#Cullin-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0680540#GO:0031461;GO:0031625;GO:0006511#1F1P1C
Repeat List (scaffold716)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53493.1	1	228	231	79.65	228	81	2e-111
Target_name	Start	End	Length	Cov(%)
sp\|D7T6D9_VITVI	3	230	744	30.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53493.1	3	228	231	74.89	226	77	3e-105
Target_name	Start	End	Length	Cov(%)
AT4G02570.1	2	227	738	30.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold716	Augustus	mRNA	44591	46388	.	-	.	ID=Dca53493.1;Parent=Dca53493
scaffold716	Augustus	exon	44591	44818	.	-	.	ID=Dca53493.1.exon1;Parent=Dca53493.1
scaffold716	Augustus	exon	44910	44957	.	-	.	ID=Dca53493.1.exon2;Parent=Dca53493.1
scaffold716	Augustus	exon	45117	45302	.	-	.	ID=Dca53493.1.exon3;Parent=Dca53493.1
scaffold716	Augustus	exon	46070	46169	.	-	.	ID=Dca53493.1.exon4;Parent=Dca53493.1
scaffold716	Augustus	exon	46255	46388	.	-	.	ID=Dca53493.1.exon5;Parent=Dca53493.1