Dca53756.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold7239)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53756.1 |
47 |
83 |
83 |
26.5 |
37 |
54 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C4S2_VITVI |
195 |
235 |
1027 |
3.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53756.1 |
6 |
148 |
557 |
7.71 |
143 |
30 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
234 |
359 |
707 |
17.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7239 |
Augustus |
mRNA |
7570 |
12660 |
. |
- |
. |
ID=Dca53756.1;Parent=Dca53756 |
| scaffold7239 |
Augustus |
exon |
7570 |
8782 |
. |
- |
. |
ID=Dca53756.1.exon1;Parent=Dca53756.1 |
| scaffold7239 |
Augustus |
exon |
12078 |
12377 |
. |
- |
. |
ID=Dca53756.1.exon2;Parent=Dca53756.1 |
| scaffold7239 |
Augustus |
exon |
12500 |
12660 |
. |
- |
. |
ID=Dca53756.1.exon3;Parent=Dca53756.1 |
