Carnation DB

Dca53788.1

Annotation

7-exons
f-1
sp|B9HBL0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_801931#unknown#0F0P0C
AT2G37670.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:15797384-15800536 REVERSE LENGTH=903
Repeat List (scaffold7246)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53788.1	1	1013	1013	53.01	1013	52	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HBL0_POPTR	1	939	939	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53788.1	1	1013	1013	47.77	1013	47	0
Target_name	Start	End	Length	Cov(%)
AT2G37670.1	7	903	903	99.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7246	Augustus	mRNA	22720	26566	.	-	.	ID=Dca53788.1;Parent=Dca53788
scaffold7246	Augustus	exon	22720	23468	.	-	.	ID=Dca53788.1.exon1;Parent=Dca53788.1
scaffold7246	Augustus	exon	23545	23638	.	-	.	ID=Dca53788.1.exon2;Parent=Dca53788.1
scaffold7246	Augustus	exon	23723	23802	.	-	.	ID=Dca53788.1.exon3;Parent=Dca53788.1
scaffold7246	Augustus	exon	24081	24132	.	-	.	ID=Dca53788.1.exon4;Parent=Dca53788.1
scaffold7246	Augustus	exon	24329	24486	.	-	.	ID=Dca53788.1.exon5;Parent=Dca53788.1
scaffold7246	Augustus	exon	24582	24675	.	-	.	ID=Dca53788.1.exon6;Parent=Dca53788.1
scaffold7246	Augustus	exon	24752	26566	.	-	.	ID=Dca53788.1.exon7;Parent=Dca53788.1