Dca53835.1
Annotation
- 4-exons
- f-1
- sp|B9MZJ8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827334#unknown#0F0P0C
- AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like superfamily protein | chr3:1418573-1422723 REVERSE LENGTH=753
- Repeat List (scaffold726)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53835.1 |
53 |
136 |
182 |
39.01 |
84 |
85 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MZJ8_POPTR |
470 |
553 |
761 |
11.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53835.1 |
53 |
135 |
182 |
31.31 |
83 |
69 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05090.1 |
467 |
549 |
753 |
11.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold726 |
Augustus |
mRNA |
91671 |
94826 |
. |
- |
. |
ID=Dca53835.1;Parent=Dca53835 |
| scaffold726 |
Augustus |
exon |
91671 |
91796 |
. |
- |
. |
ID=Dca53835.1.exon1;Parent=Dca53835.1 |
| scaffold726 |
Augustus |
exon |
92667 |
92798 |
. |
- |
. |
ID=Dca53835.1.exon2;Parent=Dca53835.1 |
| scaffold726 |
Augustus |
exon |
93886 |
94020 |
. |
- |
. |
ID=Dca53835.1.exon3;Parent=Dca53835.1 |
| scaffold726 |
Augustus |
exon |
94671 |
94826 |
. |
- |
. |
ID=Dca53835.1.exon4;Parent=Dca53835.1 |
