Dca53946.1
Annotation
- 3-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold7299)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53946.1 |
100 |
194 |
244 |
18.44 |
95 |
48 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
3 |
95 |
275 |
33.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7299 |
Augustus |
mRNA |
2494 |
3399 |
. |
- |
. |
ID=Dca53946.1;Parent=Dca53946 |
| scaffold7299 |
Augustus |
exon |
2494 |
2646 |
. |
- |
. |
ID=Dca53946.1.exon1;Parent=Dca53946.1 |
| scaffold7299 |
Augustus |
exon |
2713 |
3000 |
. |
- |
. |
ID=Dca53946.1.exon2;Parent=Dca53946.1 |
| scaffold7299 |
Augustus |
exon |
3106 |
3399 |
. |
- |
. |
ID=Dca53946.1.exon3;Parent=Dca53946.1 |
