Carnation DB

Dca54101.1

Annotation

9-exons
f-1
sp|F6HUF2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g04050#unknown#0F0P0C
AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564
Repeat List (scaffold733)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54101.1	6	543	543	59.85	538	56	4e-138
Target_name	Start	End	Length	Cov(%)
sp\|F6HUF2_VITVI	53	624	624	91.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54101.1	27	543	543	50.09	517	51	4e-103
Target_name	Start	End	Length	Cov(%)
AT4G11740.1	71	564	564	87.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold733	Augus-PASA	mRNA	1999	6285	.	-	.	ID=Dca54101.1;Parent=Dca54101
scaffold733	Augus-PASA	exon	1999	2106	.	-	.	ID=Dca54101.1.exon1;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	2506	2562	.	-	.	ID=Dca54101.1.exon2;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	2649	2792	.	-	.	ID=Dca54101.1.exon3;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	2932	3075	.	-	.	ID=Dca54101.1.exon4;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	3398	3595	.	-	.	ID=Dca54101.1.exon5;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	4279	4507	.	-	.	ID=Dca54101.1.exon6;Parent=Dca54101.1
scaffold733	Augus-PASA	exon	5326	5444	.	-	.	ID=Dca54101.1.exon7;Parent=Dca54101.1
scaffold733	Augustus	exon	5527	5610	.	-	.	ID=Dca54101.1.exon8;Parent=Dca54101.1
scaffold733	Augustus	exon	5737	6285	.	-	.	ID=Dca54101.1.exon9;Parent=Dca54101.1