Dca54281.1
Annotation
- 4-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold7387)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54281.1 |
99 |
641 |
679 |
32.98 |
543 |
41 |
1e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
476 |
1019 |
1110 |
49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54281.1 |
99 |
548 |
679 |
21.06 |
450 |
32 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
386 |
842 |
857 |
53.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7387 |
Augustus |
mRNA |
13528 |
18743 |
. |
+ |
. |
ID=Dca54281.1;Parent=Dca54281 |
| scaffold7387 |
Augustus |
exon |
13528 |
13617 |
. |
+ |
. |
ID=Dca54281.1.exon1;Parent=Dca54281.1 |
| scaffold7387 |
Augustus |
exon |
13926 |
14170 |
. |
+ |
. |
ID=Dca54281.1.exon2;Parent=Dca54281.1 |
| scaffold7387 |
Augustus |
exon |
16908 |
18531 |
. |
+ |
. |
ID=Dca54281.1.exon3;Parent=Dca54281.1 |
| scaffold7387 |
Augustus |
exon |
18663 |
18743 |
. |
+ |
. |
ID=Dca54281.1.exon4;Parent=Dca54281.1 |
