Carnation DB

Dca54288.1

Annotation

5-exons
f-1
sp|D7M2S4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487824#unknown#0F0P0C
sp|B7U9U3_CARAS#AT5G09995-like protein#Cardaminopsis arenosa (Sand rock-cress) (Arabidopsis arenosa)#unknown#unknown#0F0P0C
Repeat List (scaffold739)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54288.1	56	245	250	46.8	190	61	6e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7M2S4_ARALL	64	257	257	75.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54288.1	56	245	250	46	190	60	2e-60
Target_name	Start	End	Length	Cov(%)
AT5G09995.2	64	257	257	75.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold739	Augustus	mRNA	50741	52860	.	+	.	ID=Dca54288.1;Parent=Dca54288
scaffold739	Augustus	exon	50741	51022	.	+	.	ID=Dca54288.1.exon1;Parent=Dca54288.1
scaffold739	Augustus	exon	51156	51206	.	+	.	ID=Dca54288.1.exon2;Parent=Dca54288.1
scaffold739	Augustus	exon	51931	52064	.	+	.	ID=Dca54288.1.exon3;Parent=Dca54288.1
scaffold739	Augustus	exon	52491	52582	.	+	.	ID=Dca54288.1.exon4;Parent=Dca54288.1
scaffold739	Augustus	exon	52667	52860	.	+	.	ID=Dca54288.1.exon5;Parent=Dca54288.1