Carnation DB

Dca54330.1

Annotation

9-exons
f-1
sp|F6GXX7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g01140#unknown#0F0P0C
AT3G51620.2 | Symbols: | PAP/OAS1 substrate-binding domain superfamily | chr3:19143859-19147944 FORWARD LENGTH=829
Repeat List (scaffold74)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54330.1	19	777	779	50.7	759	47	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GXX7_VITVI	39	882	884	95.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54330.1	17	777	779	46.72	761	45	6e-167
Target_name	Start	End	Length	Cov(%)
AT3G51620.2	32	829	829	96.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold74	Augus-PASA	mRNA	148919	155924	.	-	.	ID=Dca54330.1;Parent=Dca54330
scaffold74	Augus-PASA	exon	148919	148979	.	-	.	ID=Dca54330.1.exon1;Parent=Dca54330.1
scaffold74	Augus-PASA	exon	149307	149632	.	-	.	ID=Dca54330.1.exon2;Parent=Dca54330.1
scaffold74	Augustus	exon	149730	150748	.	-	.	ID=Dca54330.1.exon3;Parent=Dca54330.1
scaffold74	Augustus	exon	150873	151058	.	-	.	ID=Dca54330.1.exon4;Parent=Dca54330.1
scaffold74	Augustus	exon	151145	151247	.	-	.	ID=Dca54330.1.exon5;Parent=Dca54330.1
scaffold74	Augustus	exon	151328	151510	.	-	.	ID=Dca54330.1.exon6;Parent=Dca54330.1
scaffold74	Augustus	exon	151929	152021	.	-	.	ID=Dca54330.1.exon7;Parent=Dca54330.1
scaffold74	Augustus	exon	152853	153038	.	-	.	ID=Dca54330.1.exon8;Parent=Dca54330.1
scaffold74	Augustus	exon	155742	155924	.	-	.	ID=Dca54330.1.exon9;Parent=Dca54330.1