Dca54331.1
Annotation
- 3-exons
- f-1
- sp|B1GYH1_NICSY#Chromomethylase#Nicotiana sylvestris (Wood tobacco) (South American tobacco)#Name=cmt3b#GO:0003677;GO:0008168;GO:0006306#2F1P0C
- Repeat List (scaffold74)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54331.1 |
62 |
165 |
181 |
45.85 |
104 |
80 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1GYH1_NICSY |
195 |
298 |
308 |
33.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54331.1 |
61 |
164 |
181 |
43.09 |
104 |
75 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0226800-01 |
927 |
1031 |
1060 |
9.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold74 |
Augustus |
mRNA |
163002 |
163733 |
. |
+ |
. |
ID=Dca54331.1;Parent=Dca54331 |
| scaffold74 |
Augustus |
exon |
163002 |
163064 |
. |
+ |
. |
ID=Dca54331.1.exon1;Parent=Dca54331.1 |
| scaffold74 |
Augustus |
exon |
163171 |
163289 |
. |
+ |
. |
ID=Dca54331.1.exon2;Parent=Dca54331.1 |
| scaffold74 |
Augustus |
exon |
163370 |
163733 |
. |
+ |
. |
ID=Dca54331.1.exon3;Parent=Dca54331.1 |
