Carnation DB

Dca54356.1

Annotation

5-exons
f-1
sp|A5B4M3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004311#GO:0005739;GO:0004322;GO:0006879#1F1P1C
AT4G03240.1 | Symbols: ATFH, FH | frataxin homolog | chr4:1423685-1424758 REVERSE LENGTH=187
Repeat List (scaffold740)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54356.1	47	187	187	55.08	141	74	3e-59
Target_name	Start	End	Length	Cov(%)
sp\|A5B4M3_VITVI	61	201	202	69.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54356.1	65	187	187	48.12	123	74	5e-49
Target_name	Start	End	Length	Cov(%)
AT4G03240.1	64	186	187	65.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold740	Augus-PASA	mRNA	27876	29533	.	-	.	ID=Dca54356.1;Parent=Dca54356
scaffold740	Augus-PASA	exon	27876	28002	.	-	.	ID=Dca54356.1.exon1;Parent=Dca54356.1
scaffold740	Augus-PASA	exon	28126	28220	.	-	.	ID=Dca54356.1.exon2;Parent=Dca54356.1
scaffold740	Augus-PASA	exon	28353	28400	.	-	.	ID=Dca54356.1.exon3;Parent=Dca54356.1
scaffold740	Augus-PASA	exon	28841	28913	.	-	.	ID=Dca54356.1.exon4;Parent=Dca54356.1
scaffold740	Augus-PASA	exon	29313	29533	.	-	.	ID=Dca54356.1.exon5;Parent=Dca54356.1