Carnation DB

Dca54400.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold741)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54400.1	692	751	1231	3.08	60	64	3e-14
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	691	750	1717	3.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54400.1	825	1212	1231	11.04	388	31	2e-55
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	802	1248	1401	31.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold741	Augustus	mRNA	82513	92430	.	+	.	ID=Dca54400.1;Parent=Dca54400
scaffold741	Augustus	exon	82513	82822	.	+	.	ID=Dca54400.1.exon1;Parent=Dca54400.1
scaffold741	Augustus	exon	82943	84711	.	+	.	ID=Dca54400.1.exon2;Parent=Dca54400.1
scaffold741	Augustus	exon	86543	86919	.	+	.	ID=Dca54400.1.exon3;Parent=Dca54400.1
scaffold741	Augustus	exon	90101	90465	.	+	.	ID=Dca54400.1.exon4;Parent=Dca54400.1
scaffold741	Augustus	exon	91556	92430	.	+	.	ID=Dca54400.1.exon5;Parent=Dca54400.1