Carnation DB

Dca54446.1

Annotation

6-exons
f-1
sp|F6HC22_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g03600#GO:0003676;GO:0000166;GO:0008270#3F0P0C
AT3G53500.2 | Symbols: RSZ32, RS2Z32, At-RS2Z | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr3:19834557-19836507 REVERSE LENGTH=284
Repeat List (scaffold743)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54446.1	35	322	333	59.75	288	65	4e-76
Target_name	Start	End	Length	Cov(%)
sp\|F6HC22_VITVI	38	336	336	88.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54446.1	35	333	333	49.24	299	54	7e-65
Target_name	Start	End	Length	Cov(%)
AT3G53500.2	6	282	284	97.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold743	Augustus	mRNA	23233	25784	.	-	.	ID=Dca54446.1;Parent=Dca54446
scaffold743	Augustus	exon	23233	23596	.	-	.	ID=Dca54446.1.exon1;Parent=Dca54446.1
scaffold743	Augustus	exon	23707	23808	.	-	.	ID=Dca54446.1.exon2;Parent=Dca54446.1
scaffold743	Augustus	exon	24068	24270	.	-	.	ID=Dca54446.1.exon3;Parent=Dca54446.1
scaffold743	Augustus	exon	24524	24619	.	-	.	ID=Dca54446.1.exon4;Parent=Dca54446.1
scaffold743	Augustus	exon	24754	24793	.	-	.	ID=Dca54446.1.exon5;Parent=Dca54446.1
scaffold743	Augustus	exon	25588	25784	.	-	.	ID=Dca54446.1.exon6;Parent=Dca54446.1