Dca54464.1
Annotation
- 3-exons
- f-1
- sp|B9RGC2_RICCO#Ubiquitin ligase SINAT5, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1452850#GO:0005634;GO:0004842;GO:0008270;GO:0007275;GO:0006511#2F2P1C
- Repeat List (scaffold7436)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54464.1 |
1 |
303 |
303 |
89.76 |
303 |
90 |
2e-165
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RGC2_RICCO |
1 |
304 |
305 |
99.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54464.1 |
7 |
303 |
303 |
84.15 |
297 |
86 |
1e-152
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0659800-01 |
6 |
301 |
303 |
97.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7436 |
Augus-PASA |
mRNA |
1380 |
3211 |
. |
- |
. |
ID=Dca54464.1;Parent=Dca54464 |
| scaffold7436 |
Augus-PASA |
exon |
1380 |
1697 |
. |
- |
. |
ID=Dca54464.1.exon1;Parent=Dca54464.1 |
| scaffold7436 |
Augus-PASA |
exon |
1993 |
2379 |
. |
- |
. |
ID=Dca54464.1.exon2;Parent=Dca54464.1 |
| scaffold7436 |
Augustus |
exon |
3005 |
3211 |
. |
- |
. |
ID=Dca54464.1.exon3;Parent=Dca54464.1 |
