Carnation DB

Dca54502.1

Annotation

7-exons
f-1
sp|D7TNK5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00920#unknown#0F0P0C
Os09t0392000-01 Similar to mRNA, clone: RTFL01-05-M08.
Repeat List (scaffold745)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54502.1	7	523	523	80.87	517	82	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TNK5_VITVI	4	520	520	99.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54502.1	20	523	523	75.71	504	79	0
Target_name	Start	End	Length	Cov(%)
AT1G70160.1	19	523	523	96.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold745	Augus-PASA	mRNA	21141	25101	.	+	.	ID=Dca54502.1;Parent=Dca54502
scaffold745	Augus-PASA	exon	21141	21455	.	+	.	ID=Dca54502.1.exon1;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	22754	22894	.	+	.	ID=Dca54502.1.exon2;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	22982	23347	.	+	.	ID=Dca54502.1.exon3;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	23526	23768	.	+	.	ID=Dca54502.1.exon4;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	24213	24305	.	+	.	ID=Dca54502.1.exon5;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	24599	24799	.	+	.	ID=Dca54502.1.exon6;Parent=Dca54502.1
scaffold745	Augus-PASA	exon	24889	25101	.	+	.	ID=Dca54502.1.exon7;Parent=Dca54502.1