Carnation DB

Dca54529.1

Annotation

6-exons
f-1
sp|D7T043_VITVI#3-isopropylmalate dehydrogenase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g01080#GO:0005737;GO:0003862;GO:0000287;GO:0051287;GO:0009098#3F1P1C
Repeat List (scaffold746)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54529.1	1	227	235	70.63	227	60	9e-83
Target_name	Start	End	Length	Cov(%)
sp\|D7T043_VITVI	102	377	506	54.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54529.1	2	227	235	67.65	226	58	2e-80
Target_name	Start	End	Length	Cov(%)
AT1G80560.1	4	276	405	67.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold746	Augustus	mRNA	64228	67791	.	-	.	ID=Dca54529.1;Parent=Dca54529
scaffold746	Augustus	exon	64228	64371	.	-	.	ID=Dca54529.1.exon1;Parent=Dca54529.1
scaffold746	Augustus	exon	64489	64575	.	-	.	ID=Dca54529.1.exon2;Parent=Dca54529.1
scaffold746	Augustus	exon	65241	65329	.	-	.	ID=Dca54529.1.exon3;Parent=Dca54529.1
scaffold746	Augustus	exon	65432	65507	.	-	.	ID=Dca54529.1.exon4;Parent=Dca54529.1
scaffold746	Augustus	exon	66042	66127	.	-	.	ID=Dca54529.1.exon5;Parent=Dca54529.1
scaffold746	Augustus	exon	67566	67791	.	-	.	ID=Dca54529.1.exon6;Parent=Dca54529.1