Carnation DB

Dca54587.1

Annotation

5-exons
f-1
sp|F6GYT1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0117g00220#GO:0005524;GO:0016773;GO:0006139#2F1P0C
sp|B9SLE3_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0685900#GO:0005524;GO:0004137;GO:0016773#3F0P0C
Repeat List (scaffold748)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54587.1	26	369	369	68.83	344	74	3e-151
Target_name	Start	End	Length	Cov(%)
sp\|F6GYT1_VITVI	220	563	565	60.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54587.1	27	367	369	66.66	341	73	1e-142
Target_name	Start	End	Length	Cov(%)
Os05t0430200-01	134	470	476	70.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold748	Augustus	mRNA	80437	83069	.	+	.	ID=Dca54587.1;Parent=Dca54587
scaffold748	Augustus	exon	80437	80531	.	+	.	ID=Dca54587.1.exon1;Parent=Dca54587.1
scaffold748	Augustus	exon	81484	81844	.	+	.	ID=Dca54587.1.exon2;Parent=Dca54587.1
scaffold748	Augustus	exon	82024	82401	.	+	.	ID=Dca54587.1.exon3;Parent=Dca54587.1
scaffold748	Augustus	exon	82688	82755	.	+	.	ID=Dca54587.1.exon4;Parent=Dca54587.1
scaffold748	Augustus	exon	82862	83069	.	+	.	ID=Dca54587.1.exon5;Parent=Dca54587.1