Carnation DB

Dca54589.1

Annotation

12-exons
f-1
sp|D7UBL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0103g00230#GO:0005634#0F0P1C
AT1G17690.1 | Symbols: NOF1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). | chr1:6082878-6088157 REVERSE LENGTH=754
Repeat List (scaffold748)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54589.1	29	385	434	44.7	357	44	1e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7UBL1_VITVI	56	496	753	58.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54589.1	354	430	434	7.6	77	43	1e-12
Target_name	Start	End	Length	Cov(%)
AT1G17690.1	531	608	754	10.34

seqname	source	feature	start	end	score	strand	frame	group
scaffold748	Augustus	mRNA	98551	109426	.	+	.	ID=Dca54589.1;Parent=Dca54589
scaffold748	Augustus	exon	98551	98759	.	+	.	ID=Dca54589.1.exon1;Parent=Dca54589.1
scaffold748	Augustus	exon	99011	99057	.	+	.	ID=Dca54589.1.exon2;Parent=Dca54589.1
scaffold748	Augustus	exon	99377	99527	.	+	.	ID=Dca54589.1.exon3;Parent=Dca54589.1
scaffold748	Augustus	exon	100115	100259	.	+	.	ID=Dca54589.1.exon4;Parent=Dca54589.1
scaffold748	Augustus	exon	101032	101161	.	+	.	ID=Dca54589.1.exon5;Parent=Dca54589.1
scaffold748	Augustus	exon	102194	102294	.	+	.	ID=Dca54589.1.exon6;Parent=Dca54589.1
scaffold748	Augustus	exon	103128	103208	.	+	.	ID=Dca54589.1.exon7;Parent=Dca54589.1
scaffold748	Augustus	exon	103420	103598	.	+	.	ID=Dca54589.1.exon8;Parent=Dca54589.1
scaffold748	Augustus	exon	104379	104451	.	+	.	ID=Dca54589.1.exon9;Parent=Dca54589.1
scaffold748	Augustus	exon	105621	105659	.	+	.	ID=Dca54589.1.exon10;Parent=Dca54589.1
scaffold748	Augustus	exon	108626	108685	.	+	.	ID=Dca54589.1.exon11;Parent=Dca54589.1
scaffold748	Augustus	exon	109337	109426	.	+	.	ID=Dca54589.1.exon12;Parent=Dca54589.1