Dca54613.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7489)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54613.1 |
1 |
521 |
539 |
48.97 |
521 |
44 |
1e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
134 |
744 |
1501 |
40.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54613.1 |
187 |
519 |
539 |
23.19 |
333 |
37 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
95 |
431 |
707 |
47.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7489 |
Augustus |
mRNA |
1180 |
3029 |
. |
- |
. |
ID=Dca54613.1;Parent=Dca54613 |
| scaffold7489 |
Augustus |
exon |
1180 |
2234 |
. |
- |
. |
ID=Dca54613.1.exon1;Parent=Dca54613.1 |
| scaffold7489 |
Augustus |
exon |
2373 |
2750 |
. |
- |
. |
ID=Dca54613.1.exon2;Parent=Dca54613.1 |
| scaffold7489 |
Augustus |
exon |
2843 |
3029 |
. |
- |
. |
ID=Dca54613.1.exon3;Parent=Dca54613.1 |
