Carnation DB

Dca54618.1

Annotation

8-exons
f-1
sp|B9GLT3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_178300#unknown#0F0P0C
sp|B9SHV9_RICCO#Leng8 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0622260#unknown#0F0P0C
Repeat List (scaffold749)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54618.1	71	396	408	56.61	326	71	4e-136
Target_name	Start	End	Length	Cov(%)
sp\|B9GLT3_POPTR	23	347	357	91.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54618.1	28	398	408	50.49	371	56	2e-115
Target_name	Start	End	Length	Cov(%)
AT3G54380.1	31	395	406	89.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold749	Augustus	mRNA	38287	41281	.	+	.	ID=Dca54618.1;Parent=Dca54618
scaffold749	Augustus	exon	38287	38527	.	+	.	ID=Dca54618.1.exon1;Parent=Dca54618.1
scaffold749	Augustus	exon	39307	39407	.	+	.	ID=Dca54618.1.exon2;Parent=Dca54618.1
scaffold749	Augustus	exon	39626	39847	.	+	.	ID=Dca54618.1.exon3;Parent=Dca54618.1
scaffold749	Augustus	exon	40176	40400	.	+	.	ID=Dca54618.1.exon4;Parent=Dca54618.1
scaffold749	Augustus	exon	40496	40581	.	+	.	ID=Dca54618.1.exon5;Parent=Dca54618.1
scaffold749	Augus-PASA	exon	40668	40764	.	+	.	ID=Dca54618.1.exon6;Parent=Dca54618.1
scaffold749	Augus-PASA	exon	40948	41040	.	+	.	ID=Dca54618.1.exon7;Parent=Dca54618.1
scaffold749	Augus-PASA	exon	41120	41281	.	+	.	ID=Dca54618.1.exon8;Parent=Dca54618.1