Dca54657.1
Annotation
- 3-exons
- f-1
- sp|Q0ZCD0_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold75)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54657.1 |
1 |
164 |
621 |
18.84 |
164 |
71 |
2e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCD0_POPTR |
644 |
807 |
1139 |
14.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54657.1 |
3 |
124 |
621 |
7.4 |
122 |
38 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
886 |
1003 |
1539 |
7.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold75 |
Augustus |
mRNA |
108482 |
111075 |
. |
+ |
. |
ID=Dca54657.1;Parent=Dca54657 |
| scaffold75 |
Augustus |
exon |
108482 |
109039 |
. |
+ |
. |
ID=Dca54657.1.exon1;Parent=Dca54657.1 |
| scaffold75 |
Augustus |
exon |
109714 |
110793 |
. |
+ |
. |
ID=Dca54657.1.exon2;Parent=Dca54657.1 |
| scaffold75 |
Augustus |
exon |
110848 |
111075 |
. |
+ |
. |
ID=Dca54657.1.exon3;Parent=Dca54657.1 |
