Carnation DB

Dca54682.1

Annotation

5-exons
f-1
sp|B9HE75_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_655180#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Os01t0176700-01 Myb-like DNA-binding domain, SHAQKYF class domain containing protein.
Repeat List (scaffold75)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54682.1	20	324	325	43.38	305	40	1e-44
Target_name	Start	End	Length	Cov(%)
sp\|B9HE75_POPTR	16	331	351	90.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54682.1	47	280	325	32	234	39	3e-37
Target_name	Start	End	Length	Cov(%)
Os01t0176700-01	31	294	478	55.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold75	Augustus	mRNA	358295	359627	.	-	.	ID=Dca54682.1;Parent=Dca54682
scaffold75	Augustus	exon	358295	358456	.	-	.	ID=Dca54682.1.exon1;Parent=Dca54682.1
scaffold75	Augustus	exon	358550	358626	.	-	.	ID=Dca54682.1.exon2;Parent=Dca54682.1
scaffold75	Augustus	exon	358721	359006	.	-	.	ID=Dca54682.1.exon3;Parent=Dca54682.1
scaffold75	Augustus	exon	359088	359317	.	-	.	ID=Dca54682.1.exon4;Parent=Dca54682.1
scaffold75	Augustus	exon	359405	359627	.	-	.	ID=Dca54682.1.exon5;Parent=Dca54682.1