Carnation DB

Dca54685.1

Annotation

5-exons
f-1
sp|B9HYM5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_749762#unknown#0F0P0C
sp|B9S5Y6_RICCO#Protein C20orf11, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1062430#unknown#0F0P0C
Repeat List (scaffold750)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54685.1	1	225	225	93.77	225	94	1e-119
Target_name	Start	End	Length	Cov(%)
sp\|B9HYM5_POPTR	18	242	242	92.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54685.1	1	224	225	85.33	224	86	7e-110
Target_name	Start	End	Length	Cov(%)
AT1G61150.1	19	242	243	92.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold750	Augustus	mRNA	36833	38729	.	+	.	ID=Dca54685.1;Parent=Dca54685
scaffold750	Augustus	exon	36833	36992	.	+	.	ID=Dca54685.1.exon1;Parent=Dca54685.1
scaffold750	Augus-PASA	exon	37101	37207	.	+	.	ID=Dca54685.1.exon2;Parent=Dca54685.1
scaffold750	Augus-PASA	exon	37950	38081	.	+	.	ID=Dca54685.1.exon3;Parent=Dca54685.1
scaffold750	Augus-PASA	exon	38330	38486	.	+	.	ID=Dca54685.1.exon4;Parent=Dca54685.1
scaffold750	Augus-PASA	exon	38608	38729	.	+	.	ID=Dca54685.1.exon5;Parent=Dca54685.1