Dca54699.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7500)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54699.1 |
26 |
320 |
339 |
31.56 |
295 |
32 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
364 |
1501 |
22.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54699.1 |
39 |
210 |
339 |
15.92 |
172 |
32 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7500 |
Augustus |
mRNA |
11416 |
13564 |
. |
+ |
. |
ID=Dca54699.1;Parent=Dca54699 |
| scaffold7500 |
Augustus |
exon |
11416 |
12220 |
. |
+ |
. |
ID=Dca54699.1.exon1;Parent=Dca54699.1 |
| scaffold7500 |
Augustus |
exon |
12451 |
12603 |
. |
+ |
. |
ID=Dca54699.1.exon2;Parent=Dca54699.1 |
| scaffold7500 |
Augustus |
exon |
13503 |
13564 |
. |
+ |
. |
ID=Dca54699.1.exon3;Parent=Dca54699.1 |
