Dca54776.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7529)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54776.1 |
1 |
313 |
313 |
55.27 |
313 |
49 |
2e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
350 |
706 |
1501 |
23.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54776.1 |
207 |
305 |
313 |
18.53 |
99 |
59 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
60 |
158 |
591 |
16.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7529 |
Augustus |
mRNA |
12067 |
13137 |
. |
- |
. |
ID=Dca54776.1;Parent=Dca54776 |
| scaffold7529 |
Augustus |
exon |
12067 |
12389 |
. |
- |
. |
ID=Dca54776.1.exon1;Parent=Dca54776.1 |
| scaffold7529 |
Augustus |
exon |
12519 |
13137 |
. |
- |
. |
ID=Dca54776.1.exon2;Parent=Dca54776.1 |
