Dca54780.1
Annotation
- 2-exons
- f-1
- sp|A5BJD2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020846#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold753)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54780.1 |
922 |
1176 |
1190 |
12.26 |
255 |
58 |
7e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BJD2_VITVI |
1523 |
1777 |
1791 |
14.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54780.1 |
930 |
1161 |
1190 |
6.13 |
232 |
30 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1176 |
1401 |
1539 |
14.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold753 |
Augustus |
mRNA |
43777 |
49849 |
. |
- |
. |
ID=Dca54780.1;Parent=Dca54780 |
| scaffold753 |
Augustus |
exon |
43777 |
44585 |
. |
- |
. |
ID=Dca54780.1.exon1;Parent=Dca54780.1 |
| scaffold753 |
Augustus |
exon |
47086 |
49849 |
. |
- |
. |
ID=Dca54780.1.exon2;Parent=Dca54780.1 |
