Carnation DB

Dca54836.1

Annotation

6-exons
f-1
sp|B9SG71_RICCO#HIRA-interacting protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1086350#GO:0005506;GO:0051536;GO:0016226#2F1P0C
Repeat List (scaffold755)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54836.1	2	264	267	72.28	263	71	3e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9SG71_RICCO	1	265	271	97.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54836.1	55	267	267	64.41	213	81	2e-101
Target_name	Start	End	Length	Cov(%)
AT3G20970.1	66	279	283	75.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold755	Augustus	mRNA	87070	90985	.	-	.	ID=Dca54836.1;Parent=Dca54836
scaffold755	Augustus	exon	87070	87129	.	-	.	ID=Dca54836.1.exon1;Parent=Dca54836.1
scaffold755	Augustus	exon	87672	87783	.	-	.	ID=Dca54836.1.exon2;Parent=Dca54836.1
scaffold755	Augustus	exon	87885	87988	.	-	.	ID=Dca54836.1.exon3;Parent=Dca54836.1
scaffold755	Augustus	exon	89160	89335	.	-	.	ID=Dca54836.1.exon4;Parent=Dca54836.1
scaffold755	Augustus	exon	89651	89812	.	-	.	ID=Dca54836.1.exon5;Parent=Dca54836.1
scaffold755	Augustus	exon	90796	90985	.	-	.	ID=Dca54836.1.exon6;Parent=Dca54836.1