Carnation DB

Dca54887.1

Annotation

7-exons
f-1
sp|D7TAD6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g01430#GO:0016020#0F0P1C
sp|B9HY18_POPTR#Integral membrane single C2 domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=NTMC2T5.1#GO:0016020#0F0P1C
Repeat List (scaffold757)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54887.1	1	591	631	57.36	591	53	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TAD6_VITVI	1	661	667	99.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54887.1	23	591	631	53.09	569	50	1e-165
Target_name	Start	End	Length	Cov(%)
AT3G19830.1	23	687	693	95.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold757	Augustus	mRNA	12740	18432	.	+	.	ID=Dca54887.1;Parent=Dca54887
scaffold757	Augustus	exon	12740	13584	.	+	.	ID=Dca54887.1.exon1;Parent=Dca54887.1
scaffold757	Augustus	exon	13698	13853	.	+	.	ID=Dca54887.1.exon2;Parent=Dca54887.1
scaffold757	Augustus	exon	15548	15710	.	+	.	ID=Dca54887.1.exon3;Parent=Dca54887.1
scaffold757	Augustus	exon	16104	16202	.	+	.	ID=Dca54887.1.exon4;Parent=Dca54887.1
scaffold757	Augustus	exon	17346	17781	.	+	.	ID=Dca54887.1.exon5;Parent=Dca54887.1
scaffold757	Augustus	exon	17999	18063	.	+	.	ID=Dca54887.1.exon6;Parent=Dca54887.1
scaffold757	Augustus	exon	18301	18432	.	+	.	ID=Dca54887.1.exon7;Parent=Dca54887.1