Carnation DB

Dca54938.1

Annotation

6-exons
f-1
sp|B9RMF0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1080420#GO:0016791#1F0P0C
Os03t0850100-01 NLI interacting factor domain containing protein.
Repeat List (scaffold7583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54938.1	1	404	408	65.44	404	58	7e-123
Target_name	Start	End	Length	Cov(%)
sp\|B9RMF0_RICCO	1	453	455	99.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54938.1	1	391	408	57.35	391	52	4e-118
Target_name	Start	End	Length	Cov(%)
Os03t0850100-01	1	437	445	98.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7583	Augustus	mRNA	2087	6430	.	-	.	ID=Dca54938.1;Parent=Dca54938
scaffold7583	Augustus	exon	2087	2311	.	-	.	ID=Dca54938.1.exon1;Parent=Dca54938.1
scaffold7583	Augustus	exon	2645	2982	.	-	.	ID=Dca54938.1.exon2;Parent=Dca54938.1
scaffold7583	Augustus	exon	3197	3472	.	-	.	ID=Dca54938.1.exon3;Parent=Dca54938.1
scaffold7583	Augus-PASA	exon	3833	3929	.	-	.	ID=Dca54938.1.exon4;Parent=Dca54938.1
scaffold7583	Augus-PASA	exon	4391	4524	.	-	.	ID=Dca54938.1.exon5;Parent=Dca54938.1
scaffold7583	Augustus	exon	6274	6430	.	-	.	ID=Dca54938.1.exon6;Parent=Dca54938.1