Dca54956.1
Annotation
- 2-exons
- f-1
- sp|Q2R4E8_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g28730#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold759)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54956.1 |
1 |
354 |
357 |
43.13 |
354 |
40 |
7e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R4E8_ORYSJ |
1020 |
1401 |
1761 |
21.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold759 |
Augustus |
mRNA |
68485 |
69897 |
. |
+ |
. |
ID=Dca54956.1;Parent=Dca54956 |
| scaffold759 |
Augustus |
exon |
68485 |
68945 |
. |
+ |
. |
ID=Dca54956.1.exon1;Parent=Dca54956.1 |
| scaffold759 |
Augustus |
exon |
69285 |
69897 |
. |
+ |
. |
ID=Dca54956.1.exon2;Parent=Dca54956.1 |
