Carnation DB

Dca54990.1

Annotation

6-exons
f-1
sp|D7LZ80_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488833#GO:0003824;GO:0050662;GO:0000166;GO:0044237#3F1P0C
AT5G19440.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:6556493-6558123 FORWARD LENGTH=326
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54990.1	2	322	324	65.12	321	66	6e-128
Target_name	Start	End	Length	Cov(%)
sp\|D7LZ80_ARALL	4	324	326	98.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54990.1	2	324	324	65.12	323	66	1e-127
Target_name	Start	End	Length	Cov(%)
AT5G19440.1	4	326	326	99.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augus-PASA	mRNA	81078	82638	.	-	.	ID=Dca54990.1;Parent=Dca54990
scaffold76	Augus-PASA	exon	81078	81222	.	-	.	ID=Dca54990.1.exon1;Parent=Dca54990.1
scaffold76	Augus-PASA	exon	81312	81498	.	-	.	ID=Dca54990.1.exon2;Parent=Dca54990.1
scaffold76	Augus-PASA	exon	81573	81735	.	-	.	ID=Dca54990.1.exon3;Parent=Dca54990.1
scaffold76	Augus-PASA	exon	81824	82015	.	-	.	ID=Dca54990.1.exon4;Parent=Dca54990.1
scaffold76	Augus-PASA	exon	82119	82288	.	-	.	ID=Dca54990.1.exon5;Parent=Dca54990.1
scaffold76	Augus-PASA	exon	82521	82638	.	-	.	ID=Dca54990.1.exon6;Parent=Dca54990.1