Dca55004.1
Annotation
- 4-exons
- f-1
- sp|F6HA94_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0009g02780#GO:0005622;GO:0004527;GO:0003676;GO:0008270#3F0P1C
- Os01t0280000-01 Similar to Histone mRNA exonuclease 1.
- Repeat List (scaffold76)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55004.1 |
5 |
435 |
444 |
54.95 |
431 |
56 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HA94_VITVI |
23 |
451 |
452 |
94.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55004.1 |
8 |
435 |
444 |
52.02 |
428 |
53 |
2e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0280000-01 |
22 |
433 |
435 |
94.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold76 |
Augustus |
mRNA |
160954 |
166709 |
. |
- |
. |
ID=Dca55004.1;Parent=Dca55004 |
| scaffold76 |
Augustus |
exon |
160954 |
161485 |
. |
- |
. |
ID=Dca55004.1.exon1;Parent=Dca55004.1 |
| scaffold76 |
Augustus |
exon |
161860 |
162035 |
. |
- |
. |
ID=Dca55004.1.exon2;Parent=Dca55004.1 |
| scaffold76 |
Augus-PASA |
exon |
162191 |
162795 |
. |
- |
. |
ID=Dca55004.1.exon3;Parent=Dca55004.1 |
| scaffold76 |
Augustus |
exon |
166688 |
166709 |
. |
- |
. |
ID=Dca55004.1.exon4;Parent=Dca55004.1 |
