Dca55039.1
Annotation
- 2-exons
- f-1
- sp|Q6UU26_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#ORFNames=OSJNBa0096K16.17#GO:0003676;GO:0004523;GO:0015074#2F1P0C
- Repeat List (scaffold760)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55039.1 |
48 |
457 |
563 |
29.3 |
410 |
41 |
1e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6UU26_ORYSJ |
747 |
1116 |
1378 |
26.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55039.1 |
56 |
199 |
563 |
8.88 |
144 |
35 |
4e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
7 |
149 |
591 |
24.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold760 |
Augustus |
mRNA |
88156 |
89948 |
. |
+ |
. |
ID=Dca55039.1;Parent=Dca55039 |
| scaffold760 |
Augustus |
exon |
88156 |
88753 |
. |
+ |
. |
ID=Dca55039.1.exon1;Parent=Dca55039.1 |
| scaffold760 |
Augustus |
exon |
88855 |
89948 |
. |
+ |
. |
ID=Dca55039.1.exon2;Parent=Dca55039.1 |
