Dca55070.1
Annotation
- 4-exons
- f-1
- sp|B9MZE2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_680280#GO:0005509#1F0P0C
- AT5G28830.1 | Symbols: | calcium-binding EF hand family protein | chr5:10856801-10858394 FORWARD LENGTH=324
- Repeat List (scaffold761)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55070.1 |
1 |
326 |
327 |
52.59 |
326 |
52 |
3e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MZE2_POPTR |
1 |
326 |
327 |
99.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55070.1 |
4 |
322 |
327 |
47.4 |
319 |
48 |
3e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G28830.1 |
5 |
319 |
324 |
97.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold761 |
Augus-PASA |
mRNA |
77988 |
81000 |
. |
+ |
. |
ID=Dca55070.1;Parent=Dca55070 |
| scaffold761 |
Augus-PASA |
exon |
77988 |
78276 |
. |
+ |
. |
ID=Dca55070.1.exon1;Parent=Dca55070.1 |
| scaffold761 |
Augus-PASA |
exon |
79739 |
79933 |
. |
+ |
. |
ID=Dca55070.1.exon2;Parent=Dca55070.1 |
| scaffold761 |
Augus-PASA |
exon |
80294 |
80475 |
. |
+ |
. |
ID=Dca55070.1.exon3;Parent=Dca55070.1 |
| scaffold761 |
Augus-PASA |
exon |
80683 |
81000 |
. |
+ |
. |
ID=Dca55070.1.exon4;Parent=Dca55070.1 |
