Dca55180.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7643)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55180.1 |
1 |
167 |
174 |
68.39 |
167 |
72 |
1e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1362 |
1528 |
1553 |
10.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55180.1 |
1 |
160 |
174 |
43.1 |
160 |
47 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
67 |
226 |
230 |
69.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7643 |
Augustus |
mRNA |
3751 |
5571 |
. |
- |
. |
ID=Dca55180.1;Parent=Dca55180 |
| scaffold7643 |
Augustus |
exon |
3751 |
3789 |
. |
- |
. |
ID=Dca55180.1.exon1;Parent=Dca55180.1 |
| scaffold7643 |
Augustus |
exon |
5086 |
5571 |
. |
- |
. |
ID=Dca55180.1.exon2;Parent=Dca55180.1 |
