Carnation DB

Dca55270.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|O65244_ARATH#F21E10.5 protein#Arabidopsis thaliana (Mouse-ear cress)#Name=F21E10.5#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold7675)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55270.1	2	546	934	23.01	545	35	1e-99
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	132	755	1114	56.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55270.1	230	516	934	11.34	287	37	3e-48
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	352	640	857	33.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7675	Augustus	mRNA	6926	13715	.	+	.	ID=Dca55270.1;Parent=Dca55270
scaffold7675	Augustus	exon	6926	7591	.	+	.	ID=Dca55270.1.exon1;Parent=Dca55270.1
scaffold7675	Augustus	exon	7836	8781	.	+	.	ID=Dca55270.1.exon2;Parent=Dca55270.1
scaffold7675	Augustus	exon	8971	9055	.	+	.	ID=Dca55270.1.exon3;Parent=Dca55270.1
scaffold7675	Augustus	exon	9296	9760	.	+	.	ID=Dca55270.1.exon4;Parent=Dca55270.1
scaffold7675	Augustus	exon	13076	13715	.	+	.	ID=Dca55270.1.exon5;Parent=Dca55270.1