Carnation DB

Dca55342.1

Annotation

6-exons
f-1
sp|D7T0V5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g00510#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | chr1:5568482-5570487 REVERSE LENGTH=491
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55342.1	1	475	485	68.24	475	70	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T0V5_VITVI	1	469	489	95.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55342.1	22	485	485	60.41	464	62	1e-172
Target_name	Start	End	Length	Cov(%)
AT1G16280.1	18	490	491	96.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augustus	mRNA	147309	150969	.	+	.	ID=Dca55342.1;Parent=Dca55342
scaffold77	Augustus	exon	147309	147920	.	+	.	ID=Dca55342.1.exon1;Parent=Dca55342.1
scaffold77	Augustus	exon	148165	148487	.	+	.	ID=Dca55342.1.exon2;Parent=Dca55342.1
scaffold77	Augustus	exon	149171	149374	.	+	.	ID=Dca55342.1.exon3;Parent=Dca55342.1
scaffold77	Augustus	exon	149473	149554	.	+	.	ID=Dca55342.1.exon4;Parent=Dca55342.1
scaffold77	Augustus	exon	149680	149778	.	+	.	ID=Dca55342.1.exon5;Parent=Dca55342.1
scaffold77	Augustus	exon	150832	150969	.	+	.	ID=Dca55342.1.exon6;Parent=Dca55342.1