Carnation DB

Dca55343.1

Annotation

6-exons
f-1
sp|G5DVX2_SILLA#Phosphoglycerate kinase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0004618;GO:0006096#1F1P0C
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55343.1	39	483	483	85.09	445	92	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DVX2_SILLA	41	487	487	91.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55343.1	34	483	483	79.29	450	86	0
Target_name	Start	End	Length	Cov(%)
Os05t0496200-01	35	484	485	92.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augus-PASA	mRNA	151656	155543	.	-	.	ID=Dca55343.1;Parent=Dca55343
scaffold77	Augus-PASA	exon	151656	151865	.	-	.	ID=Dca55343.1.exon1;Parent=Dca55343.1
scaffold77	Augus-PASA	exon	152457	152615	.	-	.	ID=Dca55343.1.exon2;Parent=Dca55343.1
scaffold77	Augus-PASA	exon	152897	153214	.	-	.	ID=Dca55343.1.exon3;Parent=Dca55343.1
scaffold77	Augus-PASA	exon	153876	154136	.	-	.	ID=Dca55343.1.exon4;Parent=Dca55343.1
scaffold77	Augus-PASA	exon	154243	154320	.	-	.	ID=Dca55343.1.exon5;Parent=Dca55343.1
scaffold77	Augus-PASA	exon	155118	155543	.	-	.	ID=Dca55343.1.exon6;Parent=Dca55343.1